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Promoted routes from Sample

Catalogue links from an INSDC sample that were surveyed as routes: each at sample:3000 of its source's population (or the whole of it, where smaller), gated first on probe-families and hard-cases. A route here makes the catalogue mechanism's own request and reads it with the link survey's own extraction (routes.catalogue). The table is generated at build time from graph.PROMOTED. Within each direction, routes are listed in the order ranked() tries them, from the evidence and never by hand (how routes are ranked).

→ ae_experiment

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->ae_experiment:ena_filereport_aliases sample:3000@reprocessed-srs 2026-10-26 3,000 147 2,853 0 96 1 —

→ bioproject

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->bioproject:ena_filereport sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,224 1 —
2 sample->bioproject:sra_be_runinfo sample:3000@reprocessed-srs 2026-10-27 3,000 2,986 14 0 2,223 1 sra-be-history-caps-at-5000-runs
3 sample->bioproject:esummary_sra sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,224 2 esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml
4 sample->bioproject:ena_search_sample sample:3000@reprocessed-srs 2026-10-26 3,000 2,904 96 0 2,175 1 —

→ biosample

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->biosample:ddbj_dblink sample:3000@reprocessed-srs 2026-10-26 3,000 2,994 6 0 2,994 1 —
2 sample->biosample:ena_filereport sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,987 1 —
3 sample->biosample:sra_be_runinfo sample:3000@reprocessed-srs 2026-10-27 3,000 2,986 14 0 2,986 1 sra-be-history-caps-at-5000-runs
4 sample->biosample:esummary_sra sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,988 2 esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml
5 sample->biosample:biosamples_filter sample:3000@reprocessed-srs 2026-10-26 3,000 2,975 25 0 2,975 1 —
6 sample->biosample:ena_search_sample sample:3000@reprocessed-srs 2026-10-26 3,000 2,917 83 0 2,917 1 —

→ experiment

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->experiment:ddbj_dblink sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 4,448 1 —
2 sample->experiment:ena_filereport sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 4,448 1 —
3 sample->experiment:sra_be_runinfo sample:3000@reprocessed-srs 2026-10-27 3,000 2,986 14 0 4,445 1 sra-be-history-caps-at-5000-runs
4 sample->experiment:esummary_sra sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 4,449 2 esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml

→ file

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->file:sdl_original sample:3000@reprocessed-srs 2026-10-27 3,000 2,949 51 0 22,371 1 —
2 sample->file:ena_filereport_fastq sample:3000@reprocessed-srs 2026-10-26 3,000 2,876 124 0 12,097 1 —
3 sample->file:sdl sample:3000@reprocessed-srs 2026-10-27 3,000 2,996 4 0 9,166 1 —
4 sample->file:sdl_lite sample:3000@reprocessed-srs 2026-10-27 3,000 2,944 56 0 8,224 1 —
5 sample->file:ena_filereport_submitted sample:3000@reprocessed-srs 2026-10-26 3,000 217 2,783 0 3,670 1 —
6 sample->file:ena_filereport_bam sample:3000@reprocessed-srs 2026-10-26 3,000 65 2,935 0 1,308 1 —

→ geo_sample

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->geo_sample:ena_filereport_aliases sample:3000@reprocessed-srs 2026-10-26 3,000 2,337 663 0 2,342 1 —
2 sample->geo_sample:sra_be_runinfo sample:3000@reprocessed-srs 2026-10-27 3,000 2,326 674 0 2,326 1 sra-be-history-caps-at-5000-runs

→ geo_series

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->geo_series:ena_filereport_aliases sample:3000@reprocessed-srs 2026-10-26 3,000 2,328 672 0 1,810 1 —

→ study

Rank Route Corpus Date Queried Resolved Empty Failed Distinct Requests Pathologies
1 sample->study:ddbj_dblink sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,224 1 —
2 sample->study:ena_filereport sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,224 1 —
3 sample->study:sra_be_runinfo sample:3000@reprocessed-srs 2026-10-27 3,000 2,986 14 0 2,223 1 sra-be-history-caps-at-5000-runs
4 sample->study:esummary_sra sample:3000@reprocessed-srs 2026-10-26 3,000 2,987 13 0 2,224 2 esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml