Catalogue links from BioSample that were surveyed as routes: each at sample:3000 of its
source's population (or the whole of it, where smaller), gated first on probe-families and
hard-cases. A route here makes the catalogue mechanism's own request and reads it with the
link survey's own extraction (routes.catalogue). The table is generated at build time from
graph.PROMOTED. Within each direction, routes are listed in the order ranked() tries them,
from the evidence and never by hand (how routes are ranked).
→ ae_experiment
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->ae_experiment:ena_filereport_aliases |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
193 |
2,807 |
0 |
79 |
1 |
— |
→ bioproject
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->bioproject:ddbj_dblink |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
1,065 |
1 |
— |
| 2 |
biosample->bioproject:ena_filereport |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
1,065 |
1 |
— |
| 3 |
biosample->bioproject:sra_be_runinfo |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,993 |
7 |
0 |
1,063 |
1 |
sra-be-history-caps-at-5000-runs |
| 4 |
biosample->bioproject:esummary_sra |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,997 |
3 |
0 |
1,064 |
2 |
esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml |
| 5 |
biosample->bioproject:elink_biosample_bioproject |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,997 |
3 |
0 |
1,065 |
3 |
megalink-backend-flakiness |
| 6 |
biosample->bioproject:ena_search_sample |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,930 |
70 |
0 |
1,044 |
1 |
— |
| 7 |
biosample->bioproject:biosample_record |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,933 |
1,067 |
0 |
974 |
2 |
— |
→ experiment
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->experiment:ddbj_dblink |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
3,397 |
1 |
— |
| 2 |
biosample->experiment:esummary_sra |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
3,397 |
2 |
esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml |
| 3 |
biosample->experiment:elink_biosample_sra |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
3,397 |
3 |
megalink-backend-flakiness |
| 4 |
biosample->experiment:ena_filereport |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
3,294 |
1 |
— |
| 5 |
biosample->experiment:sra_be_runinfo |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,993 |
7 |
0 |
3,283 |
1 |
sra-be-history-caps-at-5000-runs |
→ file
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->file:sdl_original |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,951 |
49 |
0 |
10,334 |
1 |
— |
| 2 |
biosample->file:ena_filereport_fastq |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,918 |
82 |
0 |
7,923 |
1 |
— |
| 3 |
biosample->file:sdl |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,998 |
2 |
0 |
5,468 |
1 |
— |
| 4 |
biosample->file:sdl_lite |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,950 |
50 |
0 |
4,756 |
1 |
— |
| 5 |
biosample->file:ena_filereport_submitted |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,004 |
1,996 |
0 |
1,710 |
1 |
— |
| 6 |
biosample->file:ena_filereport_bam |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
33 |
2,967 |
0 |
55 |
1 |
— |
→ geo_sample
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->geo_sample:elink_biosample_gds |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,597 |
1,403 |
0 |
1,698 |
3 |
megalink-backend-flakiness |
| 2 |
biosample->geo_sample:ena_filereport_aliases |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,534 |
1,466 |
0 |
1,618 |
1 |
— |
| 3 |
biosample->geo_sample:sra_be_runinfo |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,490 |
1,510 |
0 |
1,490 |
1 |
sra-be-history-caps-at-5000-runs |
| 4 |
biosample->geo_sample:biosample_record |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,488 |
1,512 |
0 |
1,488 |
2 |
— |
→ geo_series
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->geo_series:ena_filereport_aliases |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
1,517 |
1,483 |
0 |
830 |
1 |
— |
→ sample
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->sample:ddbj_dblink |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
2,999 |
1 |
— |
| 2 |
biosample->sample:ena_filereport |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
2,999 |
1 |
— |
| 3 |
biosample->sample:sra_be_runinfo |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,993 |
7 |
0 |
2,993 |
1 |
sra-be-history-caps-at-5000-runs |
| 4 |
biosample->sample:biosample_record |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
2,999 |
2 |
— |
| 5 |
biosample->sample:esummary_sra |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
2,999 |
2 |
esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml |
| 6 |
biosample->sample:biosamples_record |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-27 |
3,000 |
2,957 |
3 |
40 |
2,957 |
1 |
— |
| 7 |
biosample->sample:ena_search_sample |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,927 |
73 |
0 |
2,927 |
1 |
— |
→ study
| Rank |
Route |
Corpus |
Date |
Queried |
Resolved |
Empty |
Failed |
Distinct |
Requests |
Pathologies |
| 1 |
biosample->study:ena_filereport |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
1,067 |
1 |
— |
| 2 |
biosample->study:sra_be_runinfo |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,993 |
7 |
0 |
1,065 |
1 |
sra-be-history-caps-at-5000-runs |
| 3 |
biosample->study:esummary_sra |
sample:3000@results-of:bioproject->biosample:ena_filereport@reprocessed-prj |
2026-10-26 |
3,000 |
2,999 |
1 |
0 |
1,066 |
2 |
esummary-500-uid-limit, esummary-sra-buries-accessions-in-expxml |