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Link survey results

What the link survey measured, link by link, over seeded draws of 300 accessions of each source node: 300 BioProjects per issuing archive and all 137 DDBJ ones, 300 runs per archive, and so on. Every table below is generated at build time from link_splits.json, which is generated from the committed exports. A number on this page therefore cannot drift from the verdicts it summarises.

How to read a row:

  • Usable / queried is the count of accessions for which the link found something usable: reached, and every check made on what it found passed.
  • Resolved · empty · failed are the survey's three outcomes.
  • Status is the link's overall status. It is surveyed where any stratum found something usable.
  • Rows are in link order. None of this is a ranking. At 300, a share carries up to ±5.7 points, enough to say a link answers always, sometimes or never, and too coarse to say which of two links answers better.

A row of zeros is usually not a failure. Where a shared node is stratified by archive, most cross-archive cells are empty by construction: a PRJEB's runs never name a DDBJ sample. A link is drawn on the route graph where any stratum found it usable.

The survey ran on 2026-10-19 and 2026-10-20 (UTC). 983 of the 1,031 links no route measures were surveyed. The 48 that were not are:

  • the six SDL-on-project and SDL-on-study units, which failed their gate;
  • every link out of an NCBI, DDBJ or EBI analysis. Those nodes have no population to draw from. The EBI one is recorded as such because its derivation found no analysis in any of 737 BioProjects.

Wave 1: INSDC samples

Links into an INSDC sample or a BioSample, and ENA's filereport between INSDC records.

What it found:

  • ENA's links endpoint answers for a minority of projects. BioProject → BioSample through links/study found BioSamples for 120 of 300 PRJEBs, 50 of 300 PRJNAs and none of 137 PRJDBs. ENA's own filereport found them for 12,730 of 12,755 in its census (BioProject to BioSample). This fits the gate's finding that links/sample stopped answering for SAMEA4437023: on this evidence the endpoint is not a route to anything.
  • Every BioSample names its INSDC sample, through three services. NCBI's BioSample record did so for 300 of 300 per archive, EBI's BioSamples for 297 to 299 (with 1 to 3 failures), and ENA's sample search for 289 to 299.
  • The reverse holds too. An SRS, ERS or DRS gives its BioSample through EBI BioSamples' filter for 290 to 300 of 300, and through ENA's sample search for 288 to 300. ELink SRA → BioSample answered for 296 to 300 of 300 experiments per archive.
  • An ArrayExpress SDRF names an INSDC sample less often than it names a study. Comment[ENA_SAMPLE] and its kin named an ENA sample for 129 of 300 studies and an NCBI one for 87. Seven studies failed outright: their SDRF is not served.
  • No BioProject in this corpus has an EBI analysis, so filereport's analysis result reached no sample at all. Those links are surveyed-none: they exist (the probe used PRJEB44468) and never answer over this project's records.
Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
bioproject->biosample:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1754 — surveyed
bioproject->biosample:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 35945 — surveyed
bioproject->biosample:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6360 — surveyed
bioproject->biosample:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->biosample:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->biosample:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->biosample:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->biosample:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 120 / 300 120 · 180 · 0 9433 — surveyed
bioproject->biosample:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 50 / 300 50 · 250 · 0 1405 — surveyed
bioproject->biosample:esummary_sra node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1754 — surveyed
bioproject->biosample:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 35959 — surveyed
bioproject->biosample:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6342 — surveyed
bioproject->biosample:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1754 — surveyed
bioproject->biosample:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 35941 — surveyed
bioproject->biosample:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6272 — surveyed
bioproject->sample_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sample_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sample_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sample_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sample_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sample_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ddbj:ena_filereport node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
bioproject->submission_ddbj:ena_filereport sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ddbj:ena_filereport sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ebi:ena_filereport node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ebi:ena_filereport sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 676 — surveyed
bioproject->submission_ebi:ena_filereport sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ncbi:ena_filereport node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ncbi:ena_filereport sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ncbi:ena_filereport sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 352 — surveyed
biosample->sample_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sample_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sample_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ena_filereport sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 100 — surveyed
biosample->submission_ddbj:ena_filereport sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ddbj:ena_filereport sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:ena_filereport sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:ena_filereport sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 108 — surveyed
biosample->submission_ebi:ena_filereport sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:ena_filereport sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:ena_filereport sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:ena_filereport sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 228 — surveyed
experiment_ddbj->biosample:ddbj_dblink sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 291 — surveyed
experiment_ddbj->biosample:elink_sra_biosample sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 291 — surveyed
experiment_ddbj->biosample:esummary_sra sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 291 — surveyed
experiment_ddbj->biosample:sra_be_runinfo sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 291 — surveyed
experiment_ddbj->run_ddbj:ena_filereport sample:300@node:experiment_ddbj@reprocessed-srx 275 / 300 275 · 25 · 0 375 — surveyed
experiment_ddbj->submission_ddbj:ena_filereport sample:300@node:experiment_ddbj@reprocessed-srx 275 / 300 275 · 25 · 0 108 — surveyed
experiment_ebi->biosample:ddbj_dblink sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 285 — surveyed
experiment_ebi->biosample:elink_sra_biosample sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 285 — surveyed
experiment_ebi->biosample:esummary_sra sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 285 — surveyed
experiment_ebi->biosample:sra_be_runinfo sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 285 — surveyed
experiment_ebi->run_ebi:ena_filereport sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 558 — surveyed
experiment_ebi->submission_ebi:ena_filereport sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 153 — surveyed
experiment_ncbi->biosample:ddbj_dblink sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 296 — surveyed
experiment_ncbi->biosample:elink_sra_biosample sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 296 — surveyed
experiment_ncbi->biosample:esummary_sra sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 296 — surveyed
experiment_ncbi->biosample:sra_be_runinfo sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 296 — surveyed
experiment_ncbi->submission_ncbi:ena_filereport sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 287 — surveyed
geo_sample->biosample:elink_gds_biosample sample:300@node:geo_sample@reprocessed-sample 300 / 300 300 · 0 · 0 300 — surveyed
geo_sample->biosample:esummary_sra sample:300@node:geo_sample@reprocessed-sample 286 / 300 286 · 14 · 0 286 — surveyed
geo_sample->biosample:sra_be_runinfo sample:300@node:geo_sample@reprocessed-sample 285 / 300 285 · 15 · 0 285 — surveyed
geo_series->biosample:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->biosample:elink_gds_biosample sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->sample_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ddbj->biosample:ddbj_dblink sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 249 — surveyed
run_ddbj->biosample:esummary_sra sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 249 — surveyed
run_ddbj->biosample:sra_be_runinfo sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 249 — surveyed
run_ddbj->submission_ddbj:ena_filereport sample:300@node:run_ddbj@reprocessed-srr 279 / 300 279 · 21 · 0 96 — surveyed
run_ebi->biosample:ddbj_dblink sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 279 — surveyed
run_ebi->biosample:esummary_sra sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 279 — surveyed
run_ebi->biosample:sra_be_runinfo sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 279 — surveyed
run_ebi->submission_ebi:ena_filereport sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 149 — surveyed
run_ncbi->biosample:ddbj_dblink sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 296 — surveyed
run_ncbi->biosample:esummary_sra sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 296 — surveyed
run_ncbi->biosample:sra_be_runinfo sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 296 — surveyed
run_ncbi->submission_ncbi:ena_filereport sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 274 — surveyed
sample_ddbj->submission_ddbj:ena_filereport sample:300@node:sample_ddbj@reprocessed-srs 283 / 300 283 · 17 · 0 110 — surveyed
sample_ebi->biosample:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->submission_ebi:ena_filereport sample:300@node:sample_ebi@reprocessed-srs 300 / 300 300 · 0 · 0 182 — surveyed
sample_ncbi->submission_ncbi:ena_filereport sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 289 — surveyed
study_ddbj->biosample:ddbj_dblink node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->submission_ddbj:ena_filereport node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
study_ebi->biosample:ddbj_dblink sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->biosample:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->sample_ebi:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->submission_ebi:ena_filereport sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 647 — surveyed
study_ncbi->biosample:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->submission_ncbi:ena_filereport sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 322 — surveyed
submission_ddbj->bioproject:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 95 — surveyed
submission_ddbj->biosample:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->biosample:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1088 — surveyed
submission_ddbj->biosample:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1279 — surveyed
submission_ddbj->experiment_ddbj:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1139 — surveyed
submission_ddbj->run_ddbj:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1549 — surveyed
submission_ddbj->sample_ddbj:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1088 — surveyed
submission_ddbj->sample_ddbj:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 95 / 96 95 · 1 · 0 1077 — surveyed
submission_ddbj->sample_ddbj:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1279 — surveyed
submission_ddbj->study_ddbj:ena_filereport node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 95 / 96 95 · 1 · 0 94 — surveyed
submission_ebi->bioproject:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 139 — surveyed
submission_ebi->biosample:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 0 / 149 0 · 149 · 0 0 — surveyed-none
submission_ebi->biosample:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 6246 — surveyed
submission_ebi->biosample:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 6250 — surveyed
submission_ebi->experiment_ebi:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 9484 — surveyed
submission_ebi->run_ebi:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 16812 — surveyed
submission_ebi->sample_ebi:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 113 / 149 113 · 36 · 0 3163 — surveyed
submission_ebi->sample_ebi:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 6233 — surveyed
submission_ebi->sample_ebi:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 6237 — surveyed
submission_ebi->study_ebi:ena_filereport node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 135 — surveyed
submission_ncbi->bioproject:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 272 — surveyed
submission_ncbi->biosample:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->biosample:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 7597 — surveyed
submission_ncbi->biosample:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 7978 — surveyed
submission_ncbi->experiment_ncbi:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 9204 — surveyed
submission_ncbi->run_ncbi:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 31790 — surveyed
submission_ncbi->sample_ncbi:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 272 / 274 272 · 2 · 0 7590 — surveyed
submission_ncbi->sample_ncbi:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 7597 — surveyed
submission_ncbi->sample_ncbi:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 7978 — surveyed
submission_ncbi->study_ncbi:ena_filereport node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 272 — surveyed

Wave 2: metadata documents

Links into a metadata document. A document counts as usable only if it downloads and parses with the parser this project already uses for it, and names the record asked for.

What it found:

  • Every archive's own document answers for nearly every record of its own. GEO's SOFT, MiniML, series matrix and acc.cgi answered for 300 of 300 series or samples. NCBI's SRA XML and runinfo answered for 299 or 300 runs and experiments in every archive. DDBJ's search entry answered for 296 to 300. NCBI's and EBI's BioSample records answered for 297 to 300 BioSamples of every archive.
  • ENA does not hold about 8% of DDBJ's records. ENA's browser XML answered 404 for 25 of 300 DRXs and 21 of 300 DRRs. For exactly those records ENA's filereport answers with a table that does not name them, so it downloads and does not parse. For NCBI and EBI records both answered for 296 to 300.
  • DDBJ's DRA XML holds a fifth to a third of other archives' records less. It answered 404 for 66 of 300 SRRs, 80 SRXs, 60 ERRs and 103 ERXs, and for none of DDBJ's own. DDBJ's search entry answered for the same records. So DDBJ indexes them, and the DRA XML path does not serve them.
  • An ArrayExpress study's IDF or SDRF is missing for 8 to 10 of 300 studies, as 404s. That is the same population as the 11 SDRF failures of the ArrayExpress file route.
  • runinfo answered with a table that did not name the experiment asked for 4 of 300 SRXs.
Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
ae_experiment->metadata_ae:biostudies_idf sample:300@node:ae_experiment@arrayexpress-ena 292 / 300 (downloads 292/292; parses 292/292) 292 · 0 · 8 292 — surveyed
ae_experiment->metadata_ae:biostudies_sdrf sample:300@node:ae_experiment@arrayexpress-ena 290 / 300 (downloads 290/290; parses 290/290) 290 · 0 · 10 290 — surveyed
biosample->metadata_biosample:biosample_record sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
biosample->metadata_biosample:biosample_record sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
biosample->metadata_biosample:biosample_record sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
biosample->metadata_biosample:biosamples_record sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 297 / 300 (downloads 297/297; parses 297/297) 297 · 0 · 3 297 — surveyed
biosample->metadata_biosample:biosamples_record sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 299 / 300 (downloads 299/299; parses 299/299) 299 · 0 · 1 299 — surveyed
biosample->metadata_biosample:biosamples_record sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 297 / 300 (downloads 297/297; parses 297/297) 297 · 0 · 3 297 — surveyed
experiment_ddbj->metadata_ddbj:ddbj_dra_xml sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 113 — surveyed
experiment_ddbj->metadata_ddbj:ddbj_entry_document sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ddbj->metadata_ebi:ena_browser_xml_document sample:300@node:experiment_ddbj@reprocessed-srx 275 / 300 (downloads 275/275; parses 275/275) 275 · 0 · 25 275 — surveyed
experiment_ddbj->metadata_ebi:ena_filereport_document sample:300@node:experiment_ddbj@reprocessed-srx 275 / 300 (downloads 300/300; parses 275/300) 300 · 0 · 0 300 — surveyed
experiment_ddbj->metadata_ncbi:efetch_sra_xml sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ddbj->metadata_ncbi:sra_be_runinfo_document sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ebi->metadata_ddbj:ddbj_dra_xml sample:300@node:experiment_ebi@reprocessed-srx 197 / 300 (downloads 197/197; parses 197/197) 197 · 0 · 103 96 — surveyed
experiment_ebi->metadata_ddbj:ddbj_entry_document sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ebi->metadata_ebi:ena_browser_xml_document sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ebi->metadata_ebi:ena_filereport_document sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ebi->metadata_ncbi:efetch_sra_xml sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ebi->metadata_ncbi:sra_be_runinfo_document sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ncbi->metadata_ddbj:ddbj_dra_xml sample:300@node:experiment_ncbi@reprocessed-srx 220 / 300 (downloads 220/220; parses 220/220) 220 · 0 · 80 212 — surveyed
experiment_ncbi->metadata_ddbj:ddbj_entry_document sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 (downloads 296/296; parses 296/296) 296 · 0 · 4 296 — surveyed
experiment_ncbi->metadata_ebi:ena_browser_xml_document sample:300@node:experiment_ncbi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ncbi->metadata_ebi:ena_filereport_document sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 (downloads 300/300; parses 296/300) 300 · 0 · 0 300 — surveyed
experiment_ncbi->metadata_ncbi:efetch_sra_xml sample:300@node:experiment_ncbi@reprocessed-srx 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
experiment_ncbi->metadata_ncbi:sra_be_runinfo_document sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 (downloads 300/300; parses 296/300) 300 · 0 · 0 300 — surveyed
geo_sample->metadata_geo:geo_acc_sample sample:300@node:geo_sample@reprocessed-sample 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
geo_series->metadata_geo:geo_acc_series sample:300@node:geo_series@reprocessed-gse 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
geo_series->metadata_geo:geo_miniml sample:300@node:geo_series@reprocessed-gse 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
geo_series->metadata_geo:geo_series_matrix sample:300@node:geo_series@reprocessed-gse 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 386 — surveyed
geo_series->metadata_geo:geo_soft_family sample:300@node:geo_series@reprocessed-gse 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ddbj->metadata_ddbj:ddbj_dra_xml sample:300@node:run_ddbj@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 101 — surveyed
run_ddbj->metadata_ddbj:ddbj_entry_document sample:300@node:run_ddbj@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ddbj->metadata_ebi:ena_browser_xml_document sample:300@node:run_ddbj@reprocessed-srr 279 / 300 (downloads 279/279; parses 279/279) 279 · 0 · 21 279 — surveyed
run_ddbj->metadata_ebi:ena_filereport_document sample:300@node:run_ddbj@reprocessed-srr 279 / 300 (downloads 300/300; parses 279/300) 300 · 0 · 0 300 — surveyed
run_ddbj->metadata_ncbi:efetch_sra_xml sample:300@node:run_ddbj@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ddbj->metadata_ncbi:sra_be_runinfo_document sample:300@node:run_ddbj@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ebi->metadata_ddbj:ddbj_dra_xml sample:300@node:run_ebi@reprocessed-srr 240 / 300 (downloads 240/240; parses 240/240) 240 · 0 · 60 109 — surveyed
run_ebi->metadata_ddbj:ddbj_entry_document sample:300@node:run_ebi@reprocessed-srr 299 / 300 (downloads 299/299; parses 299/299) 299 · 0 · 1 299 — surveyed
run_ebi->metadata_ebi:ena_browser_xml_document sample:300@node:run_ebi@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ebi->metadata_ebi:ena_filereport_document sample:300@node:run_ebi@reprocessed-srr 299 / 300 (downloads 300/300; parses 299/300) 300 · 0 · 0 300 — surveyed
run_ebi->metadata_ncbi:efetch_sra_xml sample:300@node:run_ebi@reprocessed-srr 299 / 300 (downloads 299/299; parses 299/299) 299 · 1 · 0 299 — surveyed
run_ebi->metadata_ncbi:sra_be_runinfo_document sample:300@node:run_ebi@reprocessed-srr 299 / 300 (downloads 300/300; parses 299/300) 300 · 0 · 0 300 — surveyed
run_ncbi->metadata_ddbj:ddbj_dra_xml sample:300@node:run_ncbi@reprocessed-srr 234 / 300 (downloads 234/234; parses 234/234) 234 · 0 · 66 212 — surveyed
run_ncbi->metadata_ddbj:ddbj_entry_document sample:300@node:run_ncbi@reprocessed-srr 299 / 300 (downloads 299/299; parses 299/299) 299 · 0 · 1 299 — surveyed
run_ncbi->metadata_ebi:ena_browser_xml_document sample:300@node:run_ncbi@reprocessed-srr 300 / 300 (downloads 300/300; parses 300/300) 300 · 0 · 0 300 — surveyed
run_ncbi->metadata_ebi:ena_filereport_document sample:300@node:run_ncbi@reprocessed-srr 299 / 300 (downloads 300/300; parses 299/300) 300 · 0 · 0 300 — surveyed
run_ncbi->metadata_ncbi:efetch_sra_xml sample:300@node:run_ncbi@reprocessed-srr 299 / 300 (downloads 299/299; parses 299/299) 299 · 1 · 0 299 — surveyed
run_ncbi->metadata_ncbi:sra_be_runinfo_document sample:300@node:run_ncbi@reprocessed-srr 299 / 300 (downloads 300/300; parses 299/300) 300 · 0 · 0 300 — surveyed

Wave 3: BioProject and ArrayExpress

Links between a BioProject and an ArrayExpress study, either way.

What it found:

  • Only an EBI project points at its ArrayExpress study. ENA's browser XML named one for 240 of 300 PRJEBs, and filereport's aliases for 238. Neither did for any PRJNA or PRJDB, as expected, since ArrayExpress submits through ENA.
  • BioStudies does not know its own projects. Searching BioStudies for a BioProject found the study for 1 of 300 PRJEBs. ENA's cross-reference service found it for 6.
  • An ArrayExpress study's own record never names its BioProject. BioStudies' study JSON named one for 0 of 300 studies; ENA's cross-references for 26. The measured route the other way is through the IDF's secondary accession (ArrayExpress to study), which answers for the study. The BioProject is one more hop.
  • A BioStudies record outside ArrayExpress names a BioProject for 5 of the 82 a first survey reached.
Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
ae_experiment->bioproject:biostudies_study sample:300@node:ae_experiment@arrayexpress-ena 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->ae_experiment:biostudies_search node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->ae_experiment:biostudies_search sample:300@node:bioproject/ebi@reprocessed-prj 1 / 300 1 · 299 · 0 1 — surveyed
bioproject->ae_experiment:biostudies_search sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed

Wave 4: the ArrayExpress sample chain

Links into and out of an ArrayExpress sample: a study's SDRF row, addressed as the study plus its Source Name (E-MTAB-5061:AZ_A1), because such a sample has no accession of its own.

This population is clustered. It is a seeded draw of 300 from the 9,757 samples the SDRFs of 290 studies listed, so it is 300 samples from fewer than 300 studies. A share here describes samples weighted by how many each study has, not studies.

What it found:

  • An SDRF lists its samples for 290 of 300 studies. The 10 failures are SDRFs that are not served.
  • An SDRF's fastq URIs are never usable. They named fastqs for 253 of 300 samples, and the usable count is 0:
  • none is verifiable, because no SDRF publishes an md5;
  • 93 sets did not download, because they point at the decommissioned mirror;
  • 84 sets are incomplete for 10x.

This is the mirror pathology measured on a draw rather than on two studies. - An SDRF names the sample's ENA records far more often than NCBI's: an ENA run for 200 of 300 samples, an NCBI run for 94; an ENA sample for 200, an NCBI sample for 80; an ENA experiment for 200, an NCBI one for 100. A GEO sample is named for 100, which are the E-GEOD imports. A BioSample is named for 181. - Processed files named by the SDRF were found for 72 samples, and 70 of them downloaded and were size-checkable.

Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
ae_experiment->ae_sample:biostudies_sdrf sample:300@node:ae_experiment@arrayexpress-ena 290 / 300 290 · 0 · 10 9757 — surveyed
ae_sample->ae_supplementary:biostudies_sdrf sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 70 / 300 (downloadable 70/72; size-checkable 70/72) 72 · 221 · 7 93 — surveyed
ae_sample->biosample:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 181 / 300 181 · 119 · 0 181 — surveyed
ae_sample->experiment_ebi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 200 / 300 200 · 100 · 0 212 — surveyed
ae_sample->experiment_ncbi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 100 / 300 100 · 200 · 0 100 — surveyed
ae_sample->fastq:biostudies_sdrf_fastq sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 0 / 300 (complete 169/253; downloadable 160/253; verifiable 0/253) 253 · 47 · 0 524 — surveyed-none
ae_sample->geo_sample:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 100 / 300 100 · 200 · 0 100 — surveyed
ae_sample->metadata_ae:biostudies_sdrf sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 293 / 300 (downloads 293/293; parses 293/293) 293 · 0 · 7 92 — surveyed
ae_sample->run_ebi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 200 / 300 200 · 100 · 0 232 — surveyed
ae_sample->run_ncbi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 94 / 300 94 · 206 · 0 118 — surveyed
ae_sample->sample_ebi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 200 / 300 200 · 100 · 0 200 — surveyed
ae_sample->sample_ncbi:biostudies_sdrf_comments sample:300@node:ae_sample@results-of:link:ae_experiment->ae_sample:biostudies_sdrf@sample:300@node:ae_experiment@arrayexpress-ena 80 / 300 80 · 220 · 0 80 — surveyed

Wave 5: read files from a run

Links from a run into its read files that no route measures. A file set is usable only if it passes all three checks:

  • downloadable: a HEAD answers at the size the archive published;
  • verifiable: the archive publishes an md5 and a size;
  • complete for 10x: both the barcode read and the cDNA read are there.

These checks were made on one run's set, chosen by seed. What the first reads of those files hold is a separate survey, the content survey, over the same 300 runs per run node. Its verdicts are the table's Fit · unfit · ? column: runs whose listed files were read and found fit, proven unfit, or left undetermined under rule fit-2.

What it found:

  • NCBI's SRA XML is a complete file route for both object types. It lists the Normalized object with an md5, and the object downloads and is complete for 289, 292 and 285 of 300 runs from DDBJ, NCBI and EBI. For the Lite object the figures are 286, 285 and
  • The incomplete ones (4 to 9 per archive) are runs whose SRA object lost the barcode read, as ERR4265292's did.
  • Two sources download and can never be verified. sra-db-be's download_path names the Lite object for 291 to 297 runs and publishes no md5. DDBJ's own fastqs download for 300 of 300 DRRs and are complete for 298, and publish no md5 either. Both are usable in practice and fail the rule that a download must be checkable, so both count 0 here.
  • DDBJ's mirror of other archives' SRA objects is half there. Its search entry names an object for 299 of 300 SRRs and ERRs, and 141 and 162 of those did not download. For DDBJ's own runs all 300 did.
  • SDL's originals are listed and cold. SDL named the submitter's fastqs for 298 of 300 SRRs, and none downloaded: they are in cold storage, named with an empty link. For ERRs it named fastqs for 232 (28 downloadable), CRAMs for 54 (3) and BAMs for 4 (0).
  • ENA lists a submitted BAM for 79 of 300 ERRs, and every one is usable. No SRR or DRR has one.
  • Read, the copies mostly agree, and the mirror does not. NCBI's SRA XML objects are fit for 238 of 299 NCBI runs, 226 of 299 EBI runs and 254 of 300 DDBJ runs, as the Normalized object SDL names is. DDBJ's mirror of NCBI objects is fit for 117: the rest are mostly objects that do not exist. ENA's submitted BAMs are fit for 53 of 79, and 22 are libraries that are not gene expression or calls left ambiguous.
Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
run_ddbj->bam:ena_filereport_bam sample:300@node:run_ddbj@reprocessed-srr 0 / 300 0 · 296 · 4 0 0 · 0 · 0 surveyed-none
run_ddbj->bam:sdl_original sample:300@node:run_ddbj@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ddbj->cram:sdl_original sample:300@node:run_ddbj@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ddbj->fastq:ddbj_entry_fastq sample:300@node:run_ddbj@reprocessed-srr 0 / 300 (complete 298/300; downloadable 300/300; verifiable 0/300) 300 · 0 · 0 603 265 · 4 · 31 surveyed-none
run_ddbj->fastq:sdl_original sample:300@node:run_ddbj@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ddbj->sra_lite:efetch_sra_files sample:300@node:run_ddbj@reprocessed-srr 286 / 300 (complete 286/297; downloadable 297/297; verifiable 297/297) 297 · 3 · 0 478 262 · 4 · 31 surveyed
run_ddbj->sra_lite:sdl_lite sample:300@node:run_ddbj@reprocessed-srr 286 / 300 (complete 286/297; downloadable 297/297; verifiable 297/297) 297 · 3 · 0 297 262 · 4 · 31 surveyed
run_ddbj->sra_lite:sra_be_runinfo_download sample:300@node:run_ddbj@reprocessed-srr 0 / 300 (complete 286/297; downloadable 297/297; verifiable 0/297) 297 · 3 · 0 297 262 · 4 · 31 surveyed-none
run_ddbj->sra_normalized:ddbj_entry_sra sample:300@node:run_ddbj@reprocessed-srr 0 / 300 (complete 289/300; downloadable 300/300; verifiable 0/300) 300 · 0 · 0 300 265 · 4 · 31 surveyed-none
run_ddbj->sra_normalized:efetch_sra_files sample:300@node:run_ddbj@reprocessed-srr 289 / 300 (complete 289/300; downloadable 300/300; verifiable 300/300) 300 · 0 · 0 496 265 · 4 · 31 surveyed
run_ebi->bam:ena_filereport_bam sample:300@node:run_ebi@reprocessed-srr 79 / 300 (complete 79/79; downloadable 79/79; verifiable 79/79) 79 · 221 · 0 79 53 · 4 · 22 surveyed
run_ebi->bam:sdl_original sample:300@node:run_ebi@reprocessed-srr 0 / 300 (complete 4/4; downloadable 0/4; verifiable 4/4) 4 · 296 · 0 4 0 · 0 · 4 surveyed-none
run_ebi->cram:sdl_original sample:300@node:run_ebi@reprocessed-srr 3 / 300 (complete 54/54; downloadable 3/54; verifiable 54/54) 54 · 246 · 0 54 2 · 0 · 52 surveyed
run_ebi->fastq:sdl_original sample:300@node:run_ebi@reprocessed-srr 27 / 300 (complete 219/232; downloadable 28/232; verifiable 232/232) 232 · 68 · 0 640 22 · 0 · 210 surveyed
run_ebi->sra_lite:efetch_sra_files sample:300@node:run_ebi@reprocessed-srr 284 / 300 (complete 284/298; downloadable 298/298; verifiable 298/298) 298 · 2 · 0 1402 234 · 2 · 61 surveyed
run_ebi->sra_lite:sdl_lite sample:300@node:run_ebi@reprocessed-srr 283 / 300 (complete 283/298; downloadable 298/298; verifiable 298/298) 298 · 2 · 0 298 234 · 2 · 62 surveyed
run_ebi->sra_lite:sra_be_runinfo_download sample:300@node:run_ebi@reprocessed-srr 0 / 300 (complete 283/297; downloadable 297/297; verifiable 0/297) 297 · 3 · 0 297 234 · 2 · 61 surveyed-none
run_ebi->sra_normalized:ddbj_entry_sra sample:300@node:run_ebi@reprocessed-srr 0 / 300 (complete 285/299; downloadable 137/299; verifiable 0/299) 299 · 0 · 1 299 98 · 1 · 200 surveyed-none
run_ebi->sra_normalized:efetch_sra_files sample:300@node:run_ebi@reprocessed-srr 285 / 300 (complete 285/299; downloadable 299/299; verifiable 299/299) 299 · 1 · 0 1406 234 · 2 · 63 surveyed
run_ncbi->bam:ena_filereport_bam sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ncbi->bam:sdl_original sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ncbi->cram:sdl_original sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 0 · 0 · 0 surveyed-none
run_ncbi->fastq:sdl_original sample:300@node:run_ncbi@reprocessed-srr 0 / 300 (complete 289/298; downloadable 0/298; verifiable 298/298) 298 · 2 · 0 905 0 · 0 · 298 surveyed-none
run_ncbi->sra_lite:efetch_sra_files sample:300@node:run_ncbi@reprocessed-srr 285 / 300 (complete 285/291; downloadable 291/291; verifiable 291/291) 291 · 9 · 0 2128 241 · 6 · 44 surveyed
run_ncbi->sra_lite:sdl_lite sample:300@node:run_ncbi@reprocessed-srr 285 / 300 (complete 285/292; downloadable 292/292; verifiable 292/292) 292 · 8 · 0 292 242 · 6 · 44 surveyed
run_ncbi->sra_lite:sra_be_runinfo_download sample:300@node:run_ncbi@reprocessed-srr 0 / 300 (complete 285/291; downloadable 291/291; verifiable 0/291) 291 · 9 · 0 291 241 · 6 · 44 surveyed-none
run_ncbi->sra_normalized:ddbj_entry_sra sample:300@node:run_ncbi@reprocessed-srr 0 / 300 (complete 292/299; downloadable 158/299; verifiable 0/299) 299 · 0 · 1 299 124 · 5 · 170 surveyed-none
run_ncbi->sra_normalized:efetch_sra_files sample:300@node:run_ncbi@reprocessed-srr 292 / 300 (complete 292/299; downloadable 299/299; verifiable 299/299) 299 · 1 · 0 2150 245 · 7 · 47 surveyed

Wave 6: everything else

The rest: NCBI's ELinks and the gds and SRA summaries, DDBJ's dblink, ENA's search and cross-reference services, BioStudies records, submissions, and read files reached from a record other than a run. 667 links were surveyed, as 991 link splits.

What it found:

  • The two NCBI runinfo-style answers reach everything SRA links. sra-db-be's runinfo and ESummary on SRA have 93 links each, and every one of them is usable somewhere. Together they are the broadest single requests in the catalogue.
  • ENA publishes no SRA object. filereport's sra_ftp column was empty for every record of every node it was asked about: 28 links, 0 of 9,386 queries. The SRA objects are NCBI's, reached through SDL and the SRA XML (wave 5).
  • None of these projects is an umbrella. ELink's umbrella-to-component link answered for 0 of 737 BioProjects, and component-to-umbrella for 76. The one umbrella the probe used, PRJNA988804, was chosen because it is one.
  • ArrayExpress imports of GEO are historical. BioStudies found an E-GEOD study for 0 of 300 reprocessed GEO series. ArrayExpress stopped importing GEO before most of them were submitted.
  • DDBJ's dblink answers for 77 of the 122 links it declares. It is the one service that links a DDBJ record to everything at once. Of the 45 that never answered, 20 lead into an analysis and 7 into a submission, which no record here reaches by any route. 6 lead into a BioProject and 6 into a GEO series: dblink does not carry those relations for these records, though other services do.
  • A record's read files from ENA are per run. filereport's fastq column reached files from 14 links (every record type) for 3,250 of 4,693 queries. The submitted-files column was usable from 19 of 42 links, for 1,572 of 14,079 queries. A BAM came from 6 of 14 links, for EBI records only.
  • No EBI analysis was reachable from any record, so all 22 filereport analysis links are surveyed-none, as their wave-1 neighbours were.
  • SDL from a record other than a run answered from 25 of 44 links where its gate allowed it at all. SDL on a project or an EBI study failed its gate and was never drawn.
Link Corpus Usable / queried Resolved · empty · failed Distinct Fit · unfit · ? (read) Status
ae_experiment->ae_supplementary:biostudies_files sample:300@node:ae_experiment@arrayexpress-ena 131 / 300 (downloadable 131/142; size-checkable 131/142) 142 · 158 · 0 2943 — surveyed
ae_experiment->ae_supplementary:biostudies_sdrf sample:300@node:ae_experiment@arrayexpress-ena 131 / 300 (downloadable 131/137; size-checkable 136/137) 137 · 153 · 10 2908 — surveyed
ae_experiment->study_ebi:biostudies_study sample:300@node:ae_experiment@arrayexpress-ena 136 / 300 136 · 164 · 0 136 — surveyed
ae_experiment->study_ebi:ena_xref_source sample:300@node:ae_experiment@arrayexpress-ena 26 / 300 26 · 274 · 0 26 — surveyed
ae_experiment->study_ncbi:biostudies_study sample:300@node:ae_experiment@arrayexpress-ena 164 / 300 164 · 136 · 0 164 — surveyed
ae_experiment->study_ncbi:ena_xref_source sample:300@node:ae_experiment@arrayexpress-ena 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 1 / 137 1 · 136 · 0 1 — surveyed
bioproject->analysis_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->analysis_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->analysis_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->analysis_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ebi:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->analysis_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->analysis_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->bioproject:elink_bioproject_bioproject_u2d node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->bioproject:elink_bioproject_bioproject_u2d sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->bioproject:elink_bioproject_bioproject_u2d sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->experiment_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1826 — surveyed
bioproject->experiment_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:elink_bioproject_sra_all node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1826 — surveyed
bioproject->experiment_ddbj:elink_bioproject_sra_all sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:elink_bioproject_sra_all sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:ena_links node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1826 — surveyed
bioproject->experiment_ddbj:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:esummary_sra node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1826 — surveyed
bioproject->experiment_ddbj:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 1826 — surveyed
bioproject->experiment_ddbj:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ddbj:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 124698 — surveyed
bioproject->experiment_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ebi:elink_bioproject_sra_all node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ebi:elink_bioproject_sra_all sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 124698 — surveyed
bioproject->experiment_ebi:elink_bioproject_sra_all sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->experiment_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->experiment_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->experiment_ebi:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ebi:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 123461 — surveyed
bioproject->experiment_ebi:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ebi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ebi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 124718 — surveyed
bioproject->experiment_ebi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ebi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ebi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 113016 — surveyed
bioproject->experiment_ebi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6543 — surveyed
bioproject->experiment_ncbi:elink_bioproject_sra_all node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ncbi:elink_bioproject_sra_all sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:elink_bioproject_sra_all sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6544 — surveyed
bioproject->experiment_ncbi:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ncbi:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6543 — surveyed
bioproject->experiment_ncbi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ncbi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6543 — surveyed
bioproject->experiment_ncbi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->experiment_ncbi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->experiment_ncbi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 6473 — surveyed
bioproject->geo_series:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->geo_series:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->geo_series:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 269 / 300 269 · 31 · 0 269 — surveyed
bioproject->geo_series:ena_browser_xml node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->geo_series:ena_browser_xml sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->geo_series:ena_browser_xml sample:300@node:bioproject/ncbi@reprocessed-prj 269 / 300 269 · 31 · 0 269 — surveyed
bioproject->geo_series:ena_filereport_aliases node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->geo_series:ena_filereport_aliases sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->geo_series:ena_filereport_aliases sample:300@node:bioproject/ncbi@reprocessed-prj 268 / 300 268 · 32 · 0 268 — surveyed
bioproject->geo_series:ena_search_study node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->geo_series:ena_search_study sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->geo_series:ena_search_study sample:300@node:bioproject/ncbi@reprocessed-prj 269 / 300 269 · 31 · 0 269 — surveyed
bioproject->geo_series:ena_xref_target node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->geo_series:ena_xref_target sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->geo_series:ena_xref_target sample:300@node:bioproject/ncbi@reprocessed-prj 269 / 300 269 · 31 · 0 269 — surveyed
bioproject->run_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 2312 — surveyed
bioproject->run_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:ena_links node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 2308 — surveyed
bioproject->run_ddbj:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:esummary_sra node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 2308 — surveyed
bioproject->run_ddbj:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 2308 — surveyed
bioproject->run_ddbj:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ddbj:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 118356 — surveyed
bioproject->run_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->run_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->run_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->run_ebi:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ebi:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 117115 — surveyed
bioproject->run_ebi:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ebi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ebi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 118372 — surveyed
bioproject->run_ebi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ebi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ebi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 118352 — surveyed
bioproject->run_ebi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 11205 — surveyed
bioproject->run_ncbi:ena_links node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ncbi:ena_links sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ncbi:ena_links sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 11205 — surveyed
bioproject->run_ncbi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ncbi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ncbi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 10869 — surveyed
bioproject->run_ncbi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->run_ncbi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->run_ncbi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 11205 — surveyed
bioproject->sra_lite:ena_filereport_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sra_lite:ena_filereport_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sra_lite:ena_filereport_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sra_lite:sra_be_runinfo_download node:bioproject/ddbj@reprocessed-prj 0 / 137 (complete 120/135; downloadable 135/135; verifiable 0/135) 135 · 2 · 0 2250 — surveyed-none
bioproject->sra_lite:sra_be_runinfo_download sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 (complete 276/295; downloadable 295/295; verifiable 0/295) 295 · 5 · 0 47777 — surveyed-none
bioproject->sra_lite:sra_be_runinfo_download sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 (complete 288/297; downloadable 297/297; verifiable 0/297) 297 · 3 · 0 11111 — surveyed-none
bioproject->sra_normalized:ena_filereport_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->sra_normalized:ena_filereport_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->sra_normalized:ena_filereport_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->study_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
bioproject->study_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:ena_search_study node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
bioproject->study_ddbj:ena_search_study sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:ena_search_study sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:esummary_sra node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
bioproject->study_ddbj:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
bioproject->study_ddbj:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ddbj:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 297 — surveyed
bioproject->study_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->study_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->study_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->study_ebi:ena_search_study node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ebi:ena_search_study sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 298 — surveyed
bioproject->study_ebi:ena_search_study sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ebi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ebi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 306 — surveyed
bioproject->study_ebi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ebi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ebi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 297 — surveyed
bioproject->study_ebi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 1 / 137 1 · 136 · 0 1 — surveyed
bioproject->study_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
bioproject->study_ncbi:ena_search_study node:bioproject/ddbj@reprocessed-prj 1 / 137 1 · 136 · 0 1 — surveyed
bioproject->study_ncbi:ena_search_study sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ncbi:ena_search_study sample:300@node:bioproject/ncbi@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
bioproject->study_ncbi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ncbi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ncbi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 299 — surveyed
bioproject->study_ncbi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->study_ncbi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->study_ncbi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 299 — surveyed
bioproject->submission_ddbj:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->submission_ddbj:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ddbj:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ddbj:esummary_sra node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
bioproject->submission_ddbj:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ddbj:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ddbj:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
bioproject->submission_ddbj:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ddbj:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ebi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->submission_ebi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ebi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ebi:ena_filereport_analysis node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->submission_ebi:ena_filereport_analysis sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ebi:ena_filereport_analysis sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ebi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ebi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 298 / 300 298 · 2 · 0 675 — surveyed
bioproject->submission_ebi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ebi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ebi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 297 / 300 297 · 3 · 0 677 — surveyed
bioproject->submission_ebi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ncbi:ddbj_dblink node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
bioproject->submission_ncbi:ddbj_dblink sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ncbi:ddbj_dblink sample:300@node:bioproject/ncbi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
bioproject->submission_ncbi:esummary_sra node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ncbi:esummary_sra sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ncbi:esummary_sra sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 355 — surveyed
bioproject->submission_ncbi:sra_be_runinfo node:bioproject/ddbj@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed
bioproject->submission_ncbi:sra_be_runinfo sample:300@node:bioproject/ebi@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
bioproject->submission_ncbi:sra_be_runinfo sample:300@node:bioproject/ncbi@reprocessed-prj 299 / 300 299 · 1 · 0 352 — surveyed
biosample->analysis_ddbj:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ddbj:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ddbj:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ebi:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ncbi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ncbi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->analysis_ncbi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->bioproject:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->bioproject:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->bioproject:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ddbj:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ddbj:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ddbj:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->experiment_ebi:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->experiment_ebi:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 110 / 300 110 · 190 · 0 113 — surveyed
biosample->experiment_ebi:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->experiment_ncbi:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->experiment_ncbi:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->experiment_ncbi:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 62 / 300 62 · 238 · 0 62 — surveyed
biosample->geo_series:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->geo_series:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->geo_series:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ddbj:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 399 — surveyed
biosample->run_ddbj:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ddbj:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ddbj:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ddbj:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ddbj:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ddbj:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 398 — surveyed
biosample->run_ddbj:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ddbj:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ddbj:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 398 — surveyed
biosample->run_ddbj:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ddbj:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 343 — surveyed
biosample->run_ebi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->run_ebi:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 110 / 300 110 · 190 · 0 121 — surveyed
biosample->run_ebi:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 343 — surveyed
biosample->run_ebi:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ebi:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 343 — surveyed
biosample->run_ebi:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 510 — surveyed
biosample->run_ncbi:ena_links sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:ena_links sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:ena_links sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 62 / 300 62 · 238 · 0 96 — surveyed
biosample->run_ncbi:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 510 — surveyed
biosample->run_ncbi:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->run_ncbi:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 299 / 300 299 · 1 · 0 508 — surveyed
biosample->sra_lite:ena_filereport_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sra_lite:ena_filereport_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sra_lite:ena_filereport_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sra_lite:sra_be_runinfo_download sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 (complete 258/295; downloadable 295/295; verifiable 0/295) 295 · 5 · 0 390 — surveyed-none
biosample->sra_lite:sra_be_runinfo_download sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 (complete 277/290; downloadable 290/290; verifiable 0/290) 290 · 10 · 0 333 — surveyed-none
biosample->sra_lite:sra_be_runinfo_download sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 (complete 251/296; downloadable 296/296; verifiable 0/296) 296 · 4 · 0 499 — surveyed-none
biosample->sra_normalized:ena_filereport_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sra_normalized:ena_filereport_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->sra_normalized:ena_filereport_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ddbj:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ddbj:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ddbj:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ncbi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ncbi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->study_ncbi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ena_search_sample sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ena_search_sample sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:ena_search_sample sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ddbj:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 100 — surveyed
biosample->submission_ddbj:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ddbj:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ddbj:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 100 — surveyed
biosample->submission_ddbj:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ddbj:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_filereport_analysis sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_filereport_analysis sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_filereport_analysis sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_search_sample sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_search_sample sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:ena_search_sample sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ebi:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 108 — surveyed
biosample->submission_ebi:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ebi:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 108 — surveyed
biosample->submission_ebi:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:ddbj_dblink sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:ddbj_dblink sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:ddbj_dblink sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:ena_search_sample sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:ena_search_sample sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:ena_search_sample sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
biosample->submission_ncbi:esummary_sra sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:esummary_sra sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:esummary_sra sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 228 — surveyed
biosample->submission_ncbi:sra_be_runinfo sample:300@node:biosample/ddbj@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:sra_be_runinfo sample:300@node:biosample/ebi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed
biosample->submission_ncbi:sra_be_runinfo sample:300@node:biosample/ncbi@results-of:bioproject->biosample:ena_filereport@reprocessed-prj 299 / 300 299 · 1 · 0 227 — surveyed
experiment_ddbj->analysis_ddbj:ddbj_dblink sample:300@node:experiment_ddbj@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ddbj->run_ddbj:ddbj_dblink sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 401 — surveyed
experiment_ddbj->run_ddbj:esummary_sra sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 400 — surveyed
experiment_ddbj->run_ddbj:sra_be_runinfo sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 400 — surveyed
experiment_ddbj->sra_lite:ena_filereport_sra sample:300@node:experiment_ddbj@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ddbj->sra_lite:sra_be_runinfo_download sample:300@node:experiment_ddbj@reprocessed-srx 0 / 300 (complete 283/298; downloadable 298/298; verifiable 0/298) 298 · 2 · 0 394 — surveyed-none
experiment_ddbj->sra_normalized:ena_filereport_sra sample:300@node:experiment_ddbj@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ddbj->submission_ddbj:ddbj_dblink sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 113 — surveyed
experiment_ddbj->submission_ddbj:esummary_sra sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 113 — surveyed
experiment_ddbj->submission_ddbj:sra_be_runinfo sample:300@node:experiment_ddbj@reprocessed-srx 300 / 300 300 · 0 · 0 113 — surveyed
experiment_ebi->analysis_ebi:ddbj_dblink sample:300@node:experiment_ebi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ebi->run_ebi:ddbj_dblink sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 558 — surveyed
experiment_ebi->run_ebi:esummary_sra sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 558 — surveyed
experiment_ebi->run_ebi:sra_be_runinfo sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 558 — surveyed
experiment_ebi->sra_lite:ena_filereport_sra sample:300@node:experiment_ebi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ebi->sra_lite:sra_be_runinfo_download sample:300@node:experiment_ebi@reprocessed-srx 0 / 300 (complete 291/299; downloadable 299/299; verifiable 0/299) 299 · 1 · 0 553 — surveyed-none
experiment_ebi->sra_normalized:ena_filereport_sra sample:300@node:experiment_ebi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ebi->submission_ebi:ddbj_dblink sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 153 — surveyed
experiment_ebi->submission_ebi:esummary_sra sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 153 — surveyed
experiment_ebi->submission_ebi:sra_be_runinfo sample:300@node:experiment_ebi@reprocessed-srx 300 / 300 300 · 0 · 0 153 — surveyed
experiment_ncbi->analysis_ncbi:ddbj_dblink sample:300@node:experiment_ncbi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ncbi->geo_series:ddbj_dblink sample:300@node:experiment_ncbi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ncbi->run_ncbi:ddbj_dblink sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 691 — surveyed
experiment_ncbi->run_ncbi:esummary_sra sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 691 — surveyed
experiment_ncbi->run_ncbi:sra_be_runinfo sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 691 — surveyed
experiment_ncbi->sra_lite:ena_filereport_sra sample:300@node:experiment_ncbi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ncbi->sra_lite:sra_be_runinfo_download sample:300@node:experiment_ncbi@reprocessed-srx 0 / 300 (complete 282/288; downloadable 288/288; verifiable 0/288) 288 · 12 · 0 664 — surveyed-none
experiment_ncbi->sra_normalized:ena_filereport_sra sample:300@node:experiment_ncbi@reprocessed-srx 0 / 300 0 · 300 · 0 0 — surveyed-none
experiment_ncbi->submission_ncbi:ddbj_dblink sample:300@node:experiment_ncbi@reprocessed-srx 300 / 300 300 · 0 · 0 290 — surveyed
experiment_ncbi->submission_ncbi:esummary_sra sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 287 — surveyed
experiment_ncbi->submission_ncbi:sra_be_runinfo sample:300@node:experiment_ncbi@reprocessed-srx 296 / 300 296 · 4 · 0 287 — surveyed
geo_platform->geo_sample:geo_acc_platform node:geo_platform@results-of:link:geo_series->geo_platform:geo_soft_family@sample:300@node:geo_series@reprocessed-gse 51 / 51 51 · 0 · 0 4948260 — surveyed
geo_platform->geo_series:gds_esummary_platform node:geo_platform@results-of:link:geo_series->geo_platform:geo_soft_family@sample:300@node:geo_series@reprocessed-gse 51 / 51 51 · 0 · 0 161444 — surveyed
geo_platform->geo_series:geo_acc_platform node:geo_platform@results-of:link:geo_series->geo_platform:geo_soft_family@sample:300@node:geo_series@reprocessed-gse 51 / 51 51 · 0 · 0 161501 — surveyed
geo_sample->bioproject:elink_gds_bioproject sample:300@node:geo_sample@reprocessed-sample 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_sample->experiment_ncbi:elink_gds_sra sample:300@node:geo_sample@reprocessed-sample 286 / 300 286 · 14 · 0 286 — surveyed
geo_sample->experiment_ncbi:esummary_sra sample:300@node:geo_sample@reprocessed-sample 286 / 300 286 · 14 · 0 286 — surveyed
geo_sample->experiment_ncbi:gds_esummary_sample sample:300@node:geo_sample@reprocessed-sample 300 / 300 300 · 0 · 0 300 — surveyed
geo_sample->experiment_ncbi:sra_be_runinfo sample:300@node:geo_sample@reprocessed-sample 285 / 300 285 · 15 · 0 285 — surveyed
geo_sample->geo_platform:gds_esummary_sample sample:300@node:geo_sample@reprocessed-sample 300 / 300 300 · 0 · 0 23 — surveyed
geo_sample->geo_platform:geo_acc_sample sample:300@node:geo_sample@reprocessed-sample 300 / 300 300 · 0 · 0 23 — surveyed
geo_sample->geo_series:gds_esummary_sample sample:300@node:geo_sample@reprocessed-sample 300 / 300 300 · 0 · 0 337 — surveyed
geo_sample->geo_supplementary:geo_acc_sample sample:300@node:geo_sample@reprocessed-sample 194 / 300 (downloadable 194/194; size-checkable 194/194) 194 · 106 · 0 475 — surveyed
geo_sample->sra_lite:sra_be_runinfo_download sample:300@node:geo_sample@reprocessed-sample 0 / 300 (complete 278/279; downloadable 279/279; verifiable 0/279) 279 · 21 · 0 809 — surveyed-none
geo_sample->submission_ncbi:esummary_sra sample:300@node:geo_sample@reprocessed-sample 286 / 300 286 · 14 · 0 274 — surveyed
geo_sample->submission_ncbi:sra_be_runinfo sample:300@node:geo_sample@reprocessed-sample 285 / 300 285 · 15 · 0 273 — surveyed
geo_series->ae_experiment:biostudies_search sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->analysis_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->bioproject:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 289 / 300 289 · 11 · 0 289 — surveyed
geo_series->bioproject:elink_gds_bioproject sample:300@node:geo_series@reprocessed-gse 300 / 300 300 · 0 · 0 293 — surveyed
geo_series->bioproject:ena_search_study sample:300@node:geo_series@reprocessed-gse 289 / 300 289 · 11 · 0 289 — surveyed
geo_series->bioproject:ena_xref_source sample:300@node:geo_series@reprocessed-gse 289 / 300 289 · 11 · 0 289 — surveyed
geo_series->bioproject:geo_acc_series sample:300@node:geo_series@reprocessed-gse 289 / 300 289 · 11 · 0 289 — surveyed
geo_series->bioproject:sra_be_runinfo sample:300@node:geo_series@reprocessed-gse 248 / 300 248 · 52 · 0 248 — surveyed
geo_series->experiment_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->experiment_ncbi:sra_be_runinfo sample:300@node:geo_series@reprocessed-gse 248 / 300 248 · 52 · 0 5373 — surveyed
geo_series->geo_platform:gds_esummary_series sample:300@node:geo_series@reprocessed-gse 300 / 300 300 · 0 · 0 51 — surveyed
geo_series->geo_platform:geo_acc_series sample:300@node:geo_series@reprocessed-gse 300 / 300 300 · 0 · 0 51 — surveyed
geo_series->geo_platform:geo_soft_family sample:300@node:geo_series@reprocessed-gse 300 / 300 300 · 0 · 0 51 — surveyed
geo_series->geo_sample:geo_acc_series sample:300@node:geo_series@reprocessed-gse 300 / 300 300 · 0 · 0 9042 — surveyed
geo_series->geo_sample:sra_be_runinfo sample:300@node:geo_series@reprocessed-gse 248 / 300 248 · 52 · 0 5344 — surveyed
geo_series->geo_supplementary:geo_acc_series sample:300@node:geo_series@reprocessed-gse 296 / 300 (downloadable 296/296; size-checkable 296/296) 296 · 4 · 0 563 — surveyed
geo_series->geo_supplementary:geo_soft_family sample:300@node:geo_series@reprocessed-gse 296 / 300 (downloadable 296/296; size-checkable 296/296) 296 · 4 · 0 7392 — surveyed
geo_series->run_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->run_ncbi:sra_be_runinfo sample:300@node:geo_series@reprocessed-gse 248 / 300 248 · 52 · 0 13810 — surveyed
geo_series->sra_lite:sra_be_runinfo_download sample:300@node:geo_series@reprocessed-gse 0 / 300 (complete 231/246; downloadable 246/246; verifiable 0/246) 246 · 54 · 0 13547 — surveyed-none
geo_series->study_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->study_ncbi:ena_xref_source sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->submission_ncbi:ddbj_dblink sample:300@node:geo_series@reprocessed-gse 0 / 300 0 · 300 · 0 0 — surveyed-none
geo_series->submission_ncbi:sra_be_runinfo sample:300@node:geo_series@reprocessed-gse 248 / 300 248 · 52 · 0 260 — surveyed
run_ddbj->analysis_ddbj:ddbj_dblink sample:300@node:run_ddbj@reprocessed-srr 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ddbj->experiment_ddbj:ddbj_dblink sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 256 — surveyed
run_ddbj->experiment_ddbj:esummary_sra sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 256 — surveyed
run_ddbj->experiment_ddbj:sra_be_runinfo sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 256 — surveyed
run_ddbj->submission_ddbj:ddbj_dblink sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 101 — surveyed
run_ddbj->submission_ddbj:esummary_sra sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 101 — surveyed
run_ddbj->submission_ddbj:sra_be_runinfo sample:300@node:run_ddbj@reprocessed-srr 300 / 300 300 · 0 · 0 101 — surveyed
run_ebi->analysis_ebi:ddbj_dblink sample:300@node:run_ebi@reprocessed-srr 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ebi->experiment_ebi:ddbj_dblink sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 287 — surveyed
run_ebi->experiment_ebi:esummary_sra sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 287 — surveyed
run_ebi->experiment_ebi:sra_be_runinfo sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 287 — surveyed
run_ebi->submission_ebi:ddbj_dblink sample:300@node:run_ebi@reprocessed-srr 300 / 300 300 · 0 · 0 150 — surveyed
run_ebi->submission_ebi:esummary_sra sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 148 — surveyed
run_ebi->submission_ebi:sra_be_runinfo sample:300@node:run_ebi@reprocessed-srr 299 / 300 299 · 1 · 0 149 — surveyed
run_ncbi->ae_experiment:ena_filereport_aliases sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ncbi->analysis_ncbi:ddbj_dblink sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ncbi->experiment_ncbi:ddbj_dblink sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 297 — surveyed
run_ncbi->experiment_ncbi:esummary_sra sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 297 — surveyed
run_ncbi->experiment_ncbi:sra_be_runinfo sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 297 — surveyed
run_ncbi->geo_sample:sra_be_runinfo sample:300@node:run_ncbi@reprocessed-srr 272 / 300 272 · 28 · 0 270 — surveyed
run_ncbi->geo_series:ddbj_dblink sample:300@node:run_ncbi@reprocessed-srr 0 / 300 0 · 300 · 0 0 — surveyed-none
run_ncbi->submission_ncbi:ddbj_dblink sample:300@node:run_ncbi@reprocessed-srr 300 / 300 300 · 0 · 0 275 — surveyed
run_ncbi->submission_ncbi:esummary_sra sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 274 — surveyed
run_ncbi->submission_ncbi:sra_be_runinfo sample:300@node:run_ncbi@reprocessed-srr 299 / 300 299 · 1 · 0 274 — surveyed
sample_ddbj->analysis_ddbj:ddbj_dblink sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ddbj->bioproject:ddbj_dblink sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ddbj->run_ddbj:ddbj_dblink sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 408 — surveyed
sample_ddbj->run_ddbj:esummary_sra sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 408 — surveyed
sample_ddbj->run_ddbj:sra_be_runinfo sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 408 — surveyed
sample_ddbj->sra_lite:ena_filereport_sra sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ddbj->sra_lite:sra_be_runinfo_download sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 (complete 287/293; downloadable 293/293; verifiable 0/293) 293 · 7 · 0 386 — surveyed-none
sample_ddbj->sra_normalized:ena_filereport_sra sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ddbj->submission_ddbj:ddbj_dblink sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 113 — surveyed
sample_ddbj->submission_ddbj:ena_search_sample sample:300@node:sample_ddbj@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ddbj->submission_ddbj:esummary_sra sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 113 — surveyed
sample_ddbj->submission_ddbj:sra_be_runinfo sample:300@node:sample_ddbj@reprocessed-srs 300 / 300 300 · 0 · 0 113 — surveyed
sample_ebi->analysis_ebi:ddbj_dblink sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->analysis_ebi:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->bioproject:ddbj_dblink sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->bioproject:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->experiment_ebi:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->run_ebi:ddbj_dblink sample:300@node:sample_ebi@reprocessed-srs 300 / 300 300 · 0 · 0 2014 — surveyed
sample_ebi->run_ebi:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->run_ebi:esummary_sra sample:300@node:sample_ebi@reprocessed-srs 300 / 300 300 · 0 · 0 2014 — surveyed
sample_ebi->run_ebi:sra_be_runinfo sample:300@node:sample_ebi@reprocessed-srs 299 / 300 299 · 1 · 0 2012 — surveyed
sample_ebi->sra_lite:ena_filereport_sra sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->sra_lite:sra_be_runinfo_download sample:300@node:sample_ebi@reprocessed-srs 0 / 300 (complete 288/299; downloadable 299/299; verifiable 0/299) 299 · 1 · 0 1996 — surveyed-none
sample_ebi->sra_normalized:ena_filereport_sra sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->study_ebi:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->submission_ebi:ddbj_dblink sample:300@node:sample_ebi@reprocessed-srs 300 / 300 300 · 0 · 0 200 — surveyed
sample_ebi->submission_ebi:ena_filereport_analysis sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->submission_ebi:ena_search_sample sample:300@node:sample_ebi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ebi->submission_ebi:esummary_sra sample:300@node:sample_ebi@reprocessed-srs 300 / 300 300 · 0 · 0 181 — surveyed
sample_ebi->submission_ebi:sra_be_runinfo sample:300@node:sample_ebi@reprocessed-srs 299 / 300 299 · 1 · 0 181 — surveyed
sample_ncbi->analysis_ncbi:ddbj_dblink sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->bioproject:ddbj_dblink sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->geo_series:ddbj_dblink sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->run_ncbi:ddbj_dblink sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 874 — surveyed
sample_ncbi->run_ncbi:esummary_sra sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 874 — surveyed
sample_ncbi->run_ncbi:sra_be_runinfo sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 874 — surveyed
sample_ncbi->sra_lite:ena_filereport_sra sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->sra_lite:sra_be_runinfo_download sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 (complete 290/296; downloadable 296/296; verifiable 0/296) 296 · 4 · 0 862 — surveyed-none
sample_ncbi->sra_normalized:ena_filereport_sra sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->submission_ncbi:ddbj_dblink sample:300@node:sample_ncbi@reprocessed-srs 300 / 300 300 · 0 · 0 284 — surveyed
sample_ncbi->submission_ncbi:ena_search_sample sample:300@node:sample_ncbi@reprocessed-srs 0 / 300 0 · 300 · 0 0 — surveyed-none
sample_ncbi->submission_ncbi:esummary_sra sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 288 — surveyed
sample_ncbi->submission_ncbi:sra_be_runinfo sample:300@node:sample_ncbi@reprocessed-srs 299 / 300 299 · 1 · 0 289 — surveyed
study_ddbj->analysis_ddbj:ddbj_dblink node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 1 / 137 1 · 136 · 0 1 — surveyed
study_ddbj->bam:sdl node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->bam:sdl_original node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->bioproject:ddbj_dblink node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
study_ddbj->bioproject:ena_search_study node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
study_ddbj->bioproject:esummary_sra node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
study_ddbj->bioproject:sra_be_runinfo node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 137 — surveyed
study_ddbj->cram:sdl node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->cram:sdl_original node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->fastq:sdl node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->fastq:sdl_original node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->run_ddbj:ddbj_dblink node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 2312 — surveyed
study_ddbj->run_ddbj:esummary_sra node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 2308 — surveyed
study_ddbj->run_ddbj:sra_be_runinfo node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 2308 — surveyed
study_ddbj->sra_lite:ena_filereport_sra node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->sra_lite:sdl_lite node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 121 / 137 (complete 121/135; downloadable 135/135; verifiable 135/135) 135 · 2 · 0 2254 — surveyed
study_ddbj->sra_lite:sra_be_runinfo_download node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 (complete 123/135; downloadable 135/135; verifiable 0/135) 135 · 2 · 0 2250 — surveyed-none
study_ddbj->sra_normalized:ena_filereport_sra node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 137 0 · 137 · 0 0 — surveyed-none
study_ddbj->sra_normalized:sdl node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 123 / 137 (complete 123/137; downloadable 137/137; verifiable 137/137) 137 · 0 · 0 2312 — surveyed
study_ddbj->submission_ddbj:ddbj_dblink node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 166 — surveyed
study_ddbj->submission_ddbj:esummary_sra node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
study_ddbj->submission_ddbj:sra_be_runinfo node:study_ddbj@results-of:bioproject->study:ena_filereport@reprocessed-prj 137 / 137 137 · 0 · 0 192 — surveyed
study_ebi->ae_experiment:ena_filereport_aliases sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 236 / 300 236 · 64 · 0 236 — surveyed
study_ebi->ae_experiment:ena_xref_target sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 9 / 300 9 · 291 · 0 9 — surveyed
study_ebi->analysis_ebi:ddbj_dblink sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->analysis_ebi:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->bioproject:ddbj_dblink sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
study_ebi->bioproject:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->bioproject:ena_search_study sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
study_ebi->bioproject:esummary_sra sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 301 — surveyed
study_ebi->bioproject:sra_be_runinfo sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 301 — surveyed
study_ebi->experiment_ebi:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->run_ebi:ddbj_dblink sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 93743 — surveyed
study_ebi->run_ebi:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->run_ebi:esummary_sra sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 93740 — surveyed
study_ebi->run_ebi:sra_be_runinfo sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 93740 — surveyed
study_ebi->sra_lite:ena_filereport_sra sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->sra_lite:sra_be_runinfo_download sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 (complete 283/298; downloadable 298/298; verifiable 0/298) 298 · 2 · 0 92125 — surveyed-none
study_ebi->sra_normalized:ena_filereport_sra sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->submission_ebi:ddbj_dblink sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
study_ebi->submission_ebi:ena_filereport_analysis sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ebi->submission_ebi:esummary_sra sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 631 — surveyed
study_ebi->submission_ebi:sra_be_runinfo sample:300@node:study_ebi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 648 — surveyed
study_ncbi->ae_experiment:ena_filereport_aliases sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->ae_experiment:ena_xref_target sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->analysis_ncbi:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->bam:sdl sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 4 / 300 (complete 4/4; downloadable 4/4; verifiable 4/4) 4 · 295 · 1 118 — surveyed
study_ncbi->bam:sdl_original sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 3 / 300 (complete 4/4; downloadable 3/4; verifiable 4/4) 4 · 295 · 1 131 — surveyed
study_ncbi->bioproject:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 299 — surveyed
study_ncbi->bioproject:ena_search_study sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 299 — surveyed
study_ncbi->bioproject:esummary_sra sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 298 / 300 298 · 2 · 0 298 — surveyed
study_ncbi->bioproject:sra_be_runinfo sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 299 — surveyed
study_ncbi->cram:sdl sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 299 · 1 0 — surveyed-none
study_ncbi->cram:sdl_original sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 299 · 1 0 — surveyed-none
study_ncbi->fastq:sdl sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 3 / 300 (complete 3/4; downloadable 4/4; verifiable 4/4) 4 · 295 · 1 26 — surveyed
study_ncbi->fastq:sdl_original sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 (complete 282/298; downloadable 0/298; verifiable 298/298) 298 · 1 · 1 17262 — surveyed-none
study_ncbi->geo_series:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->geo_series:ena_xref_target sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->run_ncbi:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 8525 — surveyed
study_ncbi->run_ncbi:esummary_sra sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 8525 — surveyed
study_ncbi->run_ncbi:sra_be_runinfo sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 8525 — surveyed
study_ncbi->sra_lite:ena_filereport_sra sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->sra_lite:sdl_lite sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 283 / 300 (complete 283/295; downloadable 295/295; verifiable 295/295) 295 · 5 · 0 8272 — surveyed
study_ncbi->sra_lite:sra_be_runinfo_download sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 (complete 283/295; downloadable 295/295; verifiable 0/295) 295 · 5 · 0 8271 — surveyed-none
study_ncbi->sra_normalized:ena_filereport_sra sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 0 / 300 0 · 300 · 0 0 — surveyed-none
study_ncbi->sra_normalized:sdl sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 287 / 300 (complete 287/299; downloadable 299/299; verifiable 299/299) 299 · 0 · 1 6492 — surveyed
study_ncbi->submission_ncbi:ddbj_dblink sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 300 — surveyed
study_ncbi->submission_ncbi:esummary_sra sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 325 — surveyed
study_ncbi->submission_ncbi:sra_be_runinfo sample:300@node:study_ncbi@results-of:bioproject->study:ena_filereport@reprocessed-prj 300 / 300 300 · 0 · 0 322 — surveyed
submission_ddbj->analysis_ddbj:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->bam:ena_filereport_bam node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->bam:ena_filereport_submitted node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->bioproject:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->bioproject:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 95 / 96 95 · 1 · 0 94 — surveyed
submission_ddbj->cram:ena_filereport_submitted node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->experiment_ddbj:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1139 — surveyed
submission_ddbj->experiment_ddbj:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1331 — surveyed
submission_ddbj->fastq:ena_filereport_fastq node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 86 / 96 (complete 93/96; downloadable 89/96; verifiable 96/96) 96 · 0 · 0 3037 — surveyed
submission_ddbj->fastq:ena_filereport_submitted node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->run_ddbj:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1553 — surveyed
submission_ddbj->run_ddbj:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 96 / 96 96 · 0 · 0 1743 — surveyed
submission_ddbj->sra_lite:ena_filereport_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->sra_normalized:ena_filereport_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 0 / 96 0 · 96 · 0 0 — surveyed-none
submission_ddbj->study_ddbj:ddbj_dblink node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 93 / 96 93 · 3 · 0 92 — surveyed
submission_ddbj->study_ddbj:esummary_sra node:submission_ddbj@results-of:link:run_ddbj->submission_ddbj:ena_filereport@sample:300@node:run_ddbj@reprocessed-srr 95 / 96 95 · 1 · 0 94 — surveyed
submission_ebi->ae_experiment:ena_filereport_aliases node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 112 / 149 112 · 37 · 0 109 — surveyed
submission_ebi->analysis_ebi:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 0 / 149 0 · 149 · 0 0 — surveyed-none
submission_ebi->bam:ena_filereport_bam node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 44 / 149 (complete 49/49; downloadable 44/49; verifiable 49/49) 49 · 100 · 0 3555 — surveyed
submission_ebi->bam:ena_filereport_submitted node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 2 / 149 (complete 2/2; downloadable 2/2; verifiable 2/2) 2 · 147 · 0 130 — surveyed
submission_ebi->bioproject:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 0 / 149 0 · 149 · 0 0 — surveyed-none
submission_ebi->bioproject:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 139 — surveyed
submission_ebi->cram:ena_filereport_submitted node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 23 / 149 (complete 23/23; downloadable 23/23; verifiable 23/23) 23 · 126 · 0 5250 — surveyed
submission_ebi->experiment_ebi:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 9484 — surveyed
submission_ebi->experiment_ebi:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 9488 — surveyed
submission_ebi->fastq:ena_filereport_fastq node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 61 / 149 (complete 74/79; downloadable 66/79; verifiable 79/79) 79 · 70 · 0 17985 — surveyed
submission_ebi->fastq:ena_filereport_submitted node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 116 / 149 (complete 116/124; downloadable 124/124; verifiable 124/124) 124 · 25 · 0 31469 — surveyed
submission_ebi->run_ebi:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 16812 — surveyed
submission_ebi->run_ebi:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 16824 — surveyed
submission_ebi->sra_lite:ena_filereport_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 0 / 149 0 · 149 · 0 0 — surveyed-none
submission_ebi->sra_normalized:ena_filereport_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 0 / 149 0 · 149 · 0 0 — surveyed-none
submission_ebi->study_ebi:ddbj_dblink node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 109 / 149 109 · 40 · 0 109 — surveyed
submission_ebi->study_ebi:esummary_sra node:submission_ebi@results-of:link:run_ebi->submission_ebi:ena_filereport@sample:300@node:run_ebi@reprocessed-srr 149 / 149 149 · 0 · 0 135 — surveyed
submission_ncbi->ae_experiment:ena_filereport_aliases node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->analysis_ncbi:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->bam:ena_filereport_bam node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->bam:ena_filereport_submitted node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 1 / 274 (complete 1/1; downloadable 1/1; verifiable 1/1) 1 · 273 · 0 12 — surveyed
submission_ncbi->bioproject:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->bioproject:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 272 — surveyed
submission_ncbi->cram:ena_filereport_submitted node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->experiment_ncbi:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 161 / 274 161 · 113 · 0 7262 — surveyed
submission_ncbi->experiment_ncbi:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 9698 — surveyed
submission_ncbi->fastq:ena_filereport_fastq node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 166 / 274 (complete 166/274; downloadable 274/274; verifiable 274/274) 274 · 0 · 0 51346 — surveyed
submission_ncbi->fastq:ena_filereport_submitted node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->geo_sample:ena_filereport_aliases node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 251 / 274 251 · 23 · 0 6571 — surveyed
submission_ncbi->geo_series:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->geo_series:ena_filereport_aliases node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 251 / 274 251 · 23 · 0 251 — surveyed
submission_ncbi->run_ncbi:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 31889 — surveyed
submission_ncbi->run_ncbi:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 32382 — surveyed
submission_ncbi->sra_lite:ena_filereport_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->sra_normalized:ena_filereport_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 0 / 274 0 · 274 · 0 0 — surveyed-none
submission_ncbi->study_ncbi:ddbj_dblink node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 261 / 274 261 · 13 · 0 261 — surveyed
submission_ncbi->study_ncbi:esummary_sra node:submission_ncbi@results-of:link:run_ncbi->submission_ncbi:ena_filereport@sample:300@node:run_ncbi@reprocessed-srr 274 / 274 274 · 0 · 0 272 — surveyed