Guides
Each guide covers one job. The flags it uses are all in Commands.
| Guide | Covers |
|---|---|
| Inspect and export | view, ls, and getting tables, matrices, metadata and images out, to files or to other tools |
| Subset and split | Name lists, --obs-query, split --by, what a subset keeps, --inplace |
| Concatenate | Joins, merge strategies, labels and keys, what is carried over |
| Change dtype, layout or density | recast: smaller stores, CSR or CSC, and the refusals that keep it safe |
| Convert formats | Which format to use when, and how convert gets between them |
| Pipelines and containers | Docker and Singularity, staged outputs, memory, exit codes, Zarr versions |